C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 6B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000347691 TRAPPC6B-001 ENSG00000182400 9606 - 14:39147812-39170393 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonKidneyLungMuscleOvaryPlacentaENST00000347691
Transcript ID Adipose Bladder Breast Colon Kidney Lung Muscle Ovary Placenta
ENST00000347691 0.932±0.00 1.887±0.00 2.810±0.00 1.525±0.97 2.439±0.47 2.295±0.93 0.343±0.00 1.313±0.26 0.657±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VX CIL_0003VX_0001 CGP 14:39114223-39170532
CIL_0003VY CIL_0003VY_0001 CGP 14:39147811-39183218

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021380 Trappc6b-201 protein_coding Mus_musculus 0 385
ENSMUST00000118421 Gm13880-001 processed_pseudogene Mus_musculus 0 377

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