C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00046B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000034518-ENSDARG00000034518 CGP 7955 24:33357085-33401868
GeneTranscriptPositionBiotype
ENSDARG00000010008 (vim)
vimentin
ENSDART00000003745 (vim-001) 33381611-33398137 protein_coding
ENSDARG00000034518 (trdmt1)
tRNA aspartic acid methyltransferase 1
ENSDART00000048633 (trdmt1-001) 33357085-33379210 protein_coding
ENSDART00000151845 (trdmt1-002) 33378594-33401868 processed_transcript
CIL_00046B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107614-ENSG00000026025 CGP 9606 10:17142254-17237593
GeneTranscriptPositionBiotype
ENSG00000026025 (VIM)
vimentin
ENST00000224237 (VIM-001) 17229278-17237593 protein_coding
ENST00000421459 (VIM-008) 17230609-17235085 protein_coding
ENST00000469543 (VIM-003) 17230004-17237593 nonsense_mediated_decay
ENST00000478317 (VIM-004) 17228259-17229950 processed_transcript
ENST00000478746 (VIM-005) 17228515-17229870 processed_transcript
ENST00000485947 (VIM-007) 17229291-17231093 processed_transcript
ENST00000487938 (VIM-002) 17229278-17237593 nonsense_mediated_decay
ENST00000495528 (VIM-009) 17233225-17235034 processed_transcript
ENST00000497849 (VIM-006) 17228869-17229750 processed_transcript
ENST00000544301 (VIM-201) 17228259-17237585 protein_coding
ENSG00000107614 (TRDMT1)
tRNA aspartic acid methyltransferase 1
ENST00000313936 (TRDMT1-003) 17157444-17174660 protein_coding
ENST00000354631 (TRDMT1-006) 17142254-17201672 nonsense_mediated_decay
ENST00000377799 (TRDMT1-001) 17146737-17201682 protein_coding
ENST00000424636 (TRDMT1-008) 17159153-17201580 nonsense_mediated_decay
ENST00000436968 (TRDMT1-004) 17159153-17174660 protein_coding
ENST00000451253 (TRDMT1-010) 17171820-17200567 processed_transcript
ENST00000452380 (TRDMT1-009) 17151414-17169419 processed_transcript
ENST00000479046 (TRDMT1-011) 17171908-17202054 processed_transcript
ENST00000486947 (TRDMT1-012) 17171556-17201428 processed_transcript
ENST00000488990 (TRDMT1-005) 17152935-17201657 protein_coding
ENST00000495022 (TRDMT1-007) 17148916-17201851 nonsense_mediated_decay
ENST00000525762 (TRDMT1-002) 17159153-17201580 protein_coding
ENSG00000234961 (RP11-124N14.3)
ENST00000456355 (RP11-124N14.3-001) 17233325-17234833 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046B_0001ENSDARG00000010008ENSDART00000003745ENSDARG00000034518ENSDART00000048633ENSDART00000151845CIL_00046B_0002ENSG00000026025ENST00000224237ENST00000421459ENST00000469543ENST00000478317ENST00000478746ENST00000485947ENST00000487938ENST00000495528ENST00000497849ENST00000544301ENSG00000107614ENST00000313936ENST00000354631ENST00000377799ENST00000424636ENST00000436968ENST00000451253ENST00000452380ENST00000479046ENST00000486947ENST00000488990ENST00000495022ENST00000525762ENSG00000234961ENST00000456355
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046B_0001ENSDARG00000010008ENSDART00000003745ENSDARG00000034518ENSDART00000048633CIL_00046B_0002ENSG00000026025ENST00000224237ENST00000497849ENSG00000107614ENST00000313936ENST00000354631ENST00000377799ENST00000452380ENST00000486947ENST00000488990ENSG00000234961ENST00000456355
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010008 ENSDART00000003745 N/A N/A N/A 59.191±6.01 N/A N/A 42.336±11.53 15.479±0.00 0.255±0.00 N/A 20.295±0.00 N/A N/A N/A
ENSDARG00000034518 ENSDART00000048633 N/A N/A N/A N/A N/A N/A N/A 7.134±0.00 0.663±0.00 N/A N/A N/A N/A N/A
ENSDART00000151845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000026025 ENST00000224237 1653.490±0.00 807.464±0.00 13.550±0.00 66.746±41.65 836.999±713.07 472.455±406.70 115.625±83.15 133.115±120.00 81.720±42.87 389.673±273.43 153.327±124.75 1352.265±1248.75 929.125±262.61 438.387±290.74
ENST00000421459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497849 N/A N/A 28.907±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000107614 ENST00000313936 N/A N/A N/A N/A N/A N/A N/A N/A 0.198±0.00 N/A N/A N/A N/A N/A
ENST00000354631 0.178±0.00 0.823±0.00 N/A 0.041±0.00 0.356±0.00 N/A 0.167±0.00 0.163±0.12 0.098±0.08 0.350±0.00 0.008±0.00 0.596±0.16 0.121±0.03 0.298±0.00
ENST00000377799 0.360±0.00 0.398±0.00 0.201±0.00 0.283±0.00 0.471±0.00 0.223±0.00 0.298±0.00 0.693±0.00 0.108±0.00 0.295±0.12 0.112±0.00 0.891±0.21 0.421±0.15 0.618±0.11
ENST00000424636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452380 N/A N/A N/A 0.270±0.09 N/A 0.215±0.00 N/A N/A N/A N/A N/A N/A 0.165±0.00 0.537±0.00
ENST00000479046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486947 N/A N/A N/A N/A N/A 1.085±0.00 N/A N/A N/A N/A N/A N/A N/A 0.635±0.00
ENST00000488990 N/A N/A N/A N/A N/A N/A N/A 0.458±0.00 N/A 0.219±0.00 N/A N/A N/A N/A
ENST00000495022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234961 ENST00000456355 660.696±0.00 309.749±0.00 N/A 41.318±0.00 550.899±0.00 301.265±0.00 69.987±0.00 82.808±0.00 11.453±0.00 234.836±0.00 112.243±0.00 74.896±0.00 347.029±0.00 184.120±66.06

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