C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | GDNF family receptor alpha 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000355422  |
GFRA1-002 |
ENSG00000151892 |
9606 | - |
10:116063764-116273467  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006S7 | CIL_0006S7_0001 | CGP | 10:115093365-116273467 |
| CIL_00088K | CIL_00088K_0001 | VISTA | 10:115892604-116494065 |
| CIL_0008H3 | CIL_0008H3_0001 | VISTA | 10:115937655-116538917 |
| CIL_0006FD | CIL_0006FD_0002 | CGP | 10:116056925-116380029 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005102 | TAS | receptor binding |
| GO:0005886 | IEA | plasma membrane |
| GO:0007166 | NAS | cell surface receptor signaling pathway |
| GO:0007399 | IEA | nervous system development |
| GO:0007411 | TAS | axon guidance |
| GO:0016167 | TAS | glial cell-derived neurotrophic factor receptor activity |
| GO:0019898 | TAS | extrinsic component of membrane |
| GO:0031225 | IEA | anchored component of membrane |
| GO:0035860 | TAS | glial cell-derived neurotrophic factor receptor signaling pathway |
| GO:0070062 | IDA | extracellular vesicular exosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000026076
|
Gfra1-001 | protein_coding | Mus_musculus | 0 | 1991 |
|
ENSMUST00000152507
|
Gfra1-002 | protein_coding | Mus_musculus | 0 | 1940 |
|
ENSMUST00000129100
|
Gfra1-004 | protein_coding | Mus_musculus | 0 | 1897 |
|
ENSMUST00000169850
|
Gfra1-201 | protein_coding | Mus_musculus | 0 | 1886 |
|
ENSMUST00000140141
|
Gfra1-003 | nonsense_mediated_decay | Mus_musculus | 0 | 1735 |
|
ENSMUST00000131877
|
Gfra1-005 | protein_coding | Mus_musculus | 0 | 453 |
|
ENSMUST00000138530
|
Gfra1-007 | protein_coding | Mus_musculus | 0 | 401 |
|
ENSMUST00000022699
|
Gfra2-201 | protein_coding | Mus_musculus | 8e-28 | 130 |
