C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000134787 elavl4-002 ENSDARG00000045639 7955 + 8:16523554-16631801 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000134787
Transcript ID Brain Heart Kidney Muscle
ENSDART00000134787 49.097±0.00 0.093±0.00 0.108±0.00 2.127±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000631 CIL_000631_0001 CGP 8:16019736-16632414
CIL_00063G CIL_00063G_0001 CGP 8:16523554-16778463

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003501 Elavl3-201 protein_coding Mus_musculus 0 521
ENSMUST00000102722 Elavl4-005 protein_coding Mus_musculus 0 1005
ENSMUST00000102723 Elavl4-002 protein_coding Mus_musculus 0 675
ENSMUST00000106597 Elavl4-004 protein_coding Mus_musculus 0 680
ENSMUST00000106598 Elavl4-003 protein_coding Mus_musculus 0 1000
ENSMUST00000106600 Elavl4-006 protein_coding Mus_musculus 0 1000
ENSMUST00000106601 Elavl4-007 protein_coding Mus_musculus 0 996
ENSMUST00000106603 Elavl4-001 protein_coding Mus_musculus 0 606
ENSMUST00000153200 Elavl4-009 processed_transcript Mus_musculus 0 671
ENST00000351593 ELAVL1-201 protein_coding Homo_sapiens 0 198
ENST00000357083 ELAVL4-002 protein_coding Homo_sapiens 0 961
ENST00000359227 ELAVL3-001 protein_coding Homo_sapiens 0 527
ENST00000371819 ELAVL4-006 protein_coding Homo_sapiens 0 966
ENST00000371821 ELAVL4-005 protein_coding Homo_sapiens 0 664
ENST00000371823 ELAVL4-004 protein_coding Homo_sapiens 0 658
ENST00000371824 ELAVL4-003 protein_coding Homo_sapiens 0 961
ENST00000371827 ELAVL4-001 protein_coding Homo_sapiens 0 957
ENST00000407627 ELAVL1-001 protein_coding Homo_sapiens 0 198
ENST00000438662 ELAVL3-002 protein_coding Homo_sapiens 0 713
ENST00000448907 ELAVL4-201 protein_coding Homo_sapiens 0 957
ENST00000474675 ELAVL4-009 processed_transcript Homo_sapiens 0 462
ENST00000585656 CTC-398G3.6-001 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000588853 ELAVL3-005 protein_coding Homo_sapiens 5.99994e-41 171
ENST00000596459 ELAVL1-002 protein_coding Homo_sapiens 0 198

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