C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein, large, P1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357790 RPLP1-002 ENSG00000137818 9606 + 15:69452814-69455547 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357790
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357790 600.999±0.00 1108.370±0.00 136.641±0.00 514.583±0.00 893.440±0.00 473.404±0.00 511.281±0.00 599.859±0.00 945.806±0.00 2978.780±0.00 1886.670±440.20 1129.852±167.67 396.218±117.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 TAS RNA binding
GO:0003735 NAS:IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0005925 IDA focal adhesion
GO:0006412 NAS translation
GO:0006413 TAS translational initiation
GO:0006414 TAS:IEA translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073722 Gm10073-201 protein_coding Mus_musculus 0 267
ENSMUST00000172206 Gm17511-201 protein_coding Mus_musculus 0 263
ENSMUST00000008036 Rplp1-201 protein_coding Mus_musculus 0 261
ENSMUST00000180255 Gm11942-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000189517 Gm5244-002 processed_transcript Mus_musculus 0 239
ENSMUST00000177803 Gm13249-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000179385 Gm13144-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000118208 Gm13777-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000118035 Gm13137-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000119875 Gm13163-001 processed_pseudogene Mus_musculus 0 209
ENSMUST00000117496 Gm13035-001 processed_pseudogene Mus_musculus 0 207
ENSMUST00000117047 Gm12165-001 processed_pseudogene Mus_musculus 0 198
ENSMUST00000118238 Gm13229-001 processed_pseudogene Mus_musculus 0 191
ENSMUST00000120994 Gm13246-001 processed_pseudogene Mus_musculus 8.40779e-45 183

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