C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spectrin repeat containing, nuclear envelope 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367256 SYNE1-011 ENSG00000131018 9606 - 6:152121780-152318344 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367256
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367256 2.625±0.00 4.333±0.00 5.167±0.23 1.860±0.00 1.977±0.67 1.835±0.16 2.908±0.36 0.374±0.00 3.882±0.00 2.473±0.00 2.306±1.21 0.528±0.20 3.058±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EH CIL_0005EH_0001 CGP 6:151494030-152129619
CIL_0005EI CIL_0005EI_0001 CGP 6:151656691-152637801
CIL_0002QH CIL_0002QH_0002 CGP 6:152121684-152724567

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095899 Syne1-202 protein_coding Mus_musculus 0 3055

Loading