C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chaperonin containing TCP1, subunit 3 (gamma)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368262 CCT3-016 ENSG00000163468 9606 - 1:156309014-156338247 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverMuscleENST00000368262
Transcript ID Heart Liver Muscle
ENST00000368262 4.320±0.00 9.982±0.00 10.570±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252
CIL_0008JO CIL_0008JO_0001 VISTA 1:156202708-156805613

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001452 Cct3-001 protein_coding Mus_musculus 0 2209
ENSMUST00000164166 Cct3-006 protein_coding Mus_musculus 0 1964
ENSMUST00000168062 Cct3-005 protein_coding Mus_musculus 0 1940
ENSMUST00000167718 Cct3-004 retained_intron Mus_musculus 0 1805
ENSMUST00000118023 Cct3-ps1-001 processed_pseudogene Mus_musculus 0 1600
ENSMUST00000118450 Gm11516-001 processed_pseudogene Mus_musculus 0 1463
ENSMUST00000167000 Cct3-002 retained_intron Mus_musculus 0 1088
ENSMUST00000164783 Cct3-003 retained_intron Mus_musculus 0 1066
ENSMUST00000163735 Cct3-007 protein_coding Mus_musculus 0 795

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