C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing Tcp1, subunit 3 (gamma)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001452 Cct3-001 ENSMUSG00000001416 10090 + 3:88297116-88321767 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001452
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001452 52.385±13.86 23.115±3.53 53.510±8.62 75.072±28.63 35.072±10.30 31.434±3.40 33.489±4.71 34.567±1.60 64.621±38.78 29.464±1.49 25.536±1.87 79.479±15.74 115.291±51.63 113.691±11.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002199 IDA zona pellucida receptor complex
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005832 IDA chaperonin-containing T-complex
GO:0005874 IEA microtubule
GO:0005886 IEA plasma membrane
GO:0006457 IEA protein folding
GO:0007339 IDA binding of sperm to zona pellucida
GO:0044297 IDA cell body
GO:0044822 IEA poly(A) RNA binding
GO:0046931 IMP pore complex assembly
GO:0051082 IEA unfolded protein binding
GO:0070062 IEA extracellular vesicular exosome
GO:1901998 IMP toxin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295688 CCT3-001 protein_coding Homo_sapiens 0 2409
ENST00000368256 CCT3-008 processed_transcript Homo_sapiens 0 527
ENST00000368258 CCT3-015 nonsense_mediated_decay Homo_sapiens 0 2193
ENST00000368259 CCT3-017 protein_coding Homo_sapiens 0 2036
ENST00000368261 CCT3-010 processed_transcript Homo_sapiens 0 540
ENST00000368262 CCT3-016 nonsense_mediated_decay Homo_sapiens 0 2209
ENST00000413555 CCT3-014 protein_coding Homo_sapiens 0 922
ENST00000415548 CCT3-011 protein_coding Homo_sapiens 0 472
ENST00000446905 CCT3-013 protein_coding Homo_sapiens 0 484
ENST00000463132 CCT3-012 processed_transcript Homo_sapiens 0 643
ENST00000472765 CCT3-004 protein_coding Homo_sapiens 0 2080
ENST00000478640 CCT3-019 protein_coding Homo_sapiens 0 403
ENST00000490221 CCT3-006 retained_intron Homo_sapiens 0 730
ENST00000496684 CCT3-021 protein_coding Homo_sapiens 0 933
ENST00000533194 CCT3-020 protein_coding Homo_sapiens 0 544

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