C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEP domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370966 DEPDC1-001 ENSG00000024526 9606 - 1:68474152-68497221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyOvaryPlacentaENST00000370966
Transcript ID Adrenal Brain Breast Heart Kidney Ovary Placenta
ENST00000370966 0.017±0.00 0.071±0.00 0.069±0.00 0.043±0.03 0.033±0.01 0.290±0.06 0.454±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000038 CIL_000038_0002 CGP 1:68428822-68497221

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007165 IEA signal transduction
GO:0017053 IDA transcriptional repressor complex
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0045892 IDA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106041 Depdc1a-002 protein_coding Mus_musculus 0 1827
ENSMUST00000029825 Depdc1a-003 protein_coding Mus_musculus 0 1024
ENSMUST00000120272 Depdc1a-001 protein_coding Mus_musculus 0 1024

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