C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: argininosuccinate synthase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372386 ASS1-001 ENSG00000130707 9606 + 9:130479856-130501178 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryTestisENST00000372386
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Testis
ENST00000372386 82.776±0.00 14.534±0.00 17.624±0.00 48.035±0.00 40.843±0.00 165.350±0.00 186.036±0.00 20.497±0.00 30.052±10.61 52.486±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000936 CIL_000936_0001 VISTA 9:130178260-130779710
CIL_0005UI CIL_0005UI_0001 CGP 9:130265882-130501274
CIL_0008XQ CIL_0008XQ_0001 VISTA 9:130365168-130965841
CIL_0005UH CIL_0005UH_0001 CGP 9:130444929-130638352

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053865 Gm5424-201 protein_coding Mus_musculus 0 656
ENSMUST00000102840 Ass1-001 protein_coding Mus_musculus 0 645
ENSMUST00000130195 Ass1-003 processed_transcript Mus_musculus 0 200
ENSMUST00000126474 Ass1-002 processed_transcript Mus_musculus 3.00004e-41 172

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