C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protocadherin 11 X-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373094 PCDH11X-001 ENSG00000102290 9606 + X:91834660-92623230 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryTestisENST00000373094
Transcript ID Kidney Ovary Testis
ENST00000373094 0.002±0.00 0.036±0.00 0.006±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007B8 CIL_0007B8_0001 CGP X:91434595-92623230

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0010923 IDA negative regulation of phosphatase activity
GO:0016020 IEA membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113364 Pcdh11x-202 protein_coding Mus_musculus 0 3816
ENSMUST00000113358 Pcdh11x-001 protein_coding Mus_musculus 0 3336
ENSMUST00000050239 Pcdh11x-201 protein_coding Mus_musculus 0 3243
ENSMUST00000155223 Pcdh11x-002 nonsense_mediated_decay Mus_musculus 0 935

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