C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, T
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373184 PTPRT-006 ENSG00000196090 9606 - 20:42072752-43189733 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLungOvaryPlacentaENST00000373184
Transcript ID Adrenal Brain Colon Lung Ovary Placenta
ENST00000373184 0.037±0.00 0.965±0.00 0.086±0.00 0.570±0.00 0.376±0.37 0.266±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004E5 CIL_0004E5_0001 CGP 20:41402101-43189970
CIL_0004E4 CIL_0004E4_0001 CGP 20:42072752-43464247

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0006470 IEA protein dephosphorylation
GO:0016020 IEA membrane
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109441 Ptprt-004 protein_coding Mus_musculus 0 5873
ENSMUST00000109445 Ptprt-001 protein_coding Mus_musculus 0 3736
ENSMUST00000109443 Ptprt-003 protein_coding Mus_musculus 0 3598
ENSMUST00000109442 Ptprt-002 protein_coding Mus_musculus 0 2680
ENSMUST00000153770 Ptprt-006 processed_transcript Mus_musculus 0 577
ENSMUST00000037974 Ptprm-201 protein_coding Mus_musculus 2.99878e-43 183

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