C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NDRG family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373773 NDRG3-201 ENSG00000101079 9606 - 20:36652375-36721787 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyLungMuscleOvaryPlacentaTestisENST00000373773
Transcript ID Bladder Breast Kidney Lung Muscle Ovary Placenta Testis
ENST00000373773 0.851±0.00 0.975±0.00 2.309±0.00 2.060±0.00 1.192±0.44 5.467±0.00 2.465±0.00 12.944±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000304 CIL_000304_0002 CGP 20:36612318-36746078
CIL_0000XP CIL_0000XP_0001 CGP 20:36651766-36773818

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072298 Ndrg3-001 protein_coding Mus_musculus 0 1419
ENSMUST00000069600 Ndrg3-002 protein_coding Mus_musculus 0 767
ENSMUST00000156491 Ndrg3-010 processed_transcript Mus_musculus 0 568
ENSMUST00000117381 Gm14278-001 unprocessed_pseudogene Mus_musculus 0 525
ENSMUST00000109558 Ndrg3-004 protein_coding Mus_musculus 0 494
ENSMUST00000140297 Ndrg3-008 processed_transcript Mus_musculus 0 390
ENSMUST00000149599 Ndrg3-009 processed_transcript Mus_musculus 0 209
ENSMUST00000126627 Ndrg3-003 retained_intron Mus_musculus 4.00001e-40 171

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