C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000XP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101079-ENSG00000149636 CGP 9606 20:36651766-36773818
GeneTranscriptPositionBiotype
ENSG00000101079 (NDRG3)
NDRG family member 3 		ENST00000349004 (NDRG3-001) 36651766-36746078 protein_coding
ENST00000359675 (NDRG3-005) 36651766-36746067 protein_coding
ENST00000373773 (NDRG3-201) 36652375-36721787 protein_coding
ENST00000373803 (NDRG3-003) 36651766-36746053 protein_coding
ENST00000422536 (NDRG3-004) 36671341-36700675 protein_coding
ENSG00000149636 (DSN1)
DSN1, MIS12 kinetochore complex component 		ENST00000373734 (DSN1-009) 36751795-36773818 protein_coding
ENST00000373740 (DSN1-003) 36751795-36773720 protein_coding
ENST00000373750 (DSN1-001) 36751795-36773815 protein_coding
ENST00000426836 (DSN1-201) 36751791-36773751 protein_coding
ENST00000438549 (DSN1-007) 36758087-36773770 protein_coding
ENST00000447406 (DSN1-004) 36758087-36773799 protein_coding
ENST00000448110 (DSN1-006) 36751795-36773760 protein_coding
ENST00000473615 (DSN1-008) 36751795-36773797 processed_transcript
ENST00000480153 (DSN1-002) 36751795-36773798 retained_intron
ENST00000492703 (DSN1-005) 36758087-36773749 processed_transcript
CIL_0000XP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027634-ENSMUSG00000027635 CGP 10090 2:156927345-157007154
GeneTranscriptPositionBiotype
ENSMUSG00000027634 (Ndrg3)
N-myc downstream regulated gene 3 		ENSMUST00000069600 (Ndrg3-002) 156927345-156992043 protein_coding
ENSMUST00000072298 (Ndrg3-001) 156927345-156992056 protein_coding
ENSMUST00000109558 (Ndrg3-004) 156934303-156992035 protein_coding
ENSMUST00000126627 (Ndrg3-003) 156956343-156992047 retained_intron
ENSMUST00000131955 (Ndrg3-005) 156946018-156992000 processed_transcript
ENSMUST00000132748 (Ndrg3-006) 156970061-156991996 processed_transcript
ENSMUST00000140297 (Ndrg3-008) 156938576-156953393 processed_transcript
ENSMUST00000149599 (Ndrg3-009) 156931152-156935005 processed_transcript
ENSMUST00000156491 (Ndrg3-010) 156928403-156944066 processed_transcript
ENSMUST00000156651 (Ndrg3-007) 156948261-156991927 processed_transcript
ENSMUSG00000027635 (Dsn1)
DSN1, MIND kinetochore complex component, homolog (S. cerevisiae) 		ENSMUST00000103129 (Dsn1-001) 156995265-157007075 protein_coding
ENSMUST00000103130 (Dsn1-002) 156995277-157007154 protein_coding
ENSMUST00000124671 (Dsn1-004) 157002740-157006301 protein_coding
ENSMUST00000141388 (Dsn1-007) 157001685-157003256 retained_intron
ENSMUST00000146413 (Dsn1-005) 156997724-157007030 protein_coding
ENSMUST00000154213 (Dsn1-003) 157005320-157006574 protein_coding
ENSMUSG00000082163 (Gm14276)
predicted gene 14276 		ENSMUST00000117941 (Gm14276-001) 156994173-156994892 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000XP_0001ENSG00000101079ENST00000349004ENST00000359675ENST00000373773ENST00000373803ENST00000422536ENSG00000149636ENST00000373734ENST00000373740ENST00000373750ENST00000426836ENST00000438549ENST00000447406ENST00000448110ENST00000473615ENST00000480153ENST00000492703CIL_0000XP_0002ENSMUSG00000027634ENSMUST00000069600ENSMUST00000072298ENSMUST00000109558ENSMUST00000126627ENSMUST00000131955ENSMUST00000132748ENSMUST00000140297ENSMUST00000149599ENSMUST00000156491ENSMUST00000156651ENSMUSG00000027635ENSMUST00000103129ENSMUST00000103130ENSMUST00000124671ENSMUST00000141388ENSMUST00000146413ENSMUST00000154213ENSMUSG00000082163ENSMUST00000117941
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000XP_0001ENSG00000101079ENST00000349004ENST00000359675ENST00000373773ENST00000373803ENST00000422536ENSG00000149636ENST00000373734ENST00000373740ENST00000373750ENST00000426836ENST00000438549ENST00000447406ENST00000448110ENST00000473615ENST00000480153CIL_0000XP_0002ENSMUSG00000027634ENSMUST00000069600ENSMUST00000072298ENSMUST00000131955ENSMUST00000140297ENSMUSG00000027635ENSMUST00000103129ENSMUST00000103130ENSMUST00000141388ENSMUST00000146413ENSMUST00000154213ENSMUSG00000082163ENSMUST00000117941
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101079 ENST00000349004 4.382±0.00 2.215±0.00 N/A 25.183±6.63 4.369±1.09 2.538±0.00 2.860±1.19 3.188±1.68 1.528±1.33 3.427±2.33 0.680±0.48 7.940±2.79 5.979±3.18 N/A
ENST00000359675 N/A 5.055±0.00 N/A 11.119±3.56 N/A 6.383±0.00 2.926±0.00 N/A 0.939±0.00 N/A 2.439±0.00 2.822±0.27 N/A N/A
ENST00000373773 N/A N/A 0.851±0.00 N/A 0.975±0.00 N/A N/A 2.309±0.00 N/A 2.060±0.00 1.192±0.44 5.467±0.00 2.465±0.00 12.944±0.00
ENST00000373803 N/A N/A N/A N/A N/A N/A 2.259±0.00 N/A N/A N/A N/A N/A 1.552±0.00 N/A
ENST00000422536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.713±0.00
ENSG00000149636 ENST00000373734 N/A N/A N/A 0.341±0.00 1.074±0.00 N/A N/A 1.202±0.00 0.201±0.00 N/A 0.573±0.00 1.150±0.00 N/A 8.535±0.00
ENST00000373740 0.572±0.00 N/A N/A N/A N/A N/A 0.291±0.00 0.675±0.49 N/A 0.683±0.00 N/A N/A N/A N/A
ENST00000373750 1.343±0.00 N/A N/A N/A 1.056±0.00 0.992±0.37 0.262±0.00 N/A N/A N/A N/A 0.932±0.30 2.031±0.61 N/A
ENST00000426836 0.365±0.00 1.211±0.00 N/A 0.259±0.00 N/A N/A N/A N/A N/A 0.314±0.00 N/A 0.695±0.00 0.998±0.13 N/A
ENST00000438549 N/A N/A 0.810±0.00 N/A N/A N/A N/A 1.045±0.00 N/A N/A N/A N/A N/A N/A
ENST00000447406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.333±0.00 N/A N/A N/A
ENST00000448110 N/A 1.605±0.00 N/A 1.087±0.24 0.615±0.00 N/A 0.824±0.00 0.629±0.03 0.502±0.00 0.397±0.00 0.348±0.00 0.742±0.02 1.381±0.72 2.615±0.00
ENST00000473615 N/A N/A N/A N/A N/A N/A 0.345±0.00 N/A 0.331±0.00 0.405±0.00 N/A N/A N/A N/A
ENST00000480153 N/A N/A N/A N/A 0.533±0.00 N/A 0.294±0.11 N/A 0.480±0.00 0.170±0.00 0.117±0.00 2.736±0.00 N/A 3.787±0.00
ENST00000492703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027634 ENSMUST00000069600 4.363±0.51 7.605±0.31 3.419±0.29 12.994±5.20 5.635±0.55 8.527±1.77 1.697±0.01 5.856±0.00 2.750±1.07 3.968±0.55 3.437±0.93 4.451±0.57 1.626±0.29 18.577±4.12
ENSMUST00000072298 29.025±5.70 28.497±5.10 13.486±2.07 48.447±14.58 38.896±10.87 23.935±1.84 8.616±0.61 45.179±3.53 16.944±9.32 20.004±1.26 7.066±0.90 24.380±7.01 6.652±1.60 11.453±6.81
ENSMUST00000109558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131955 N/A N/A N/A 144.564±0.00 N/A N/A N/A N/A N/A N/A N/A 26.950±0.00 8.402±0.06 34.308±0.00
ENSMUST00000132748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 64.106±5.27
ENSMUST00000149599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027635 ENSMUST00000103129 1.227±0.21 0.473±0.14 1.449±0.17 3.931±1.19 0.482±0.07 1.039±0.25 0.128±0.02 0.609±0.29 7.826±8.08 0.420±0.28 0.358±0.12 2.726±0.97 5.288±3.72 9.251±3.47
ENSMUST00000103130 N/A N/A N/A N/A 0.191±0.02 0.387±0.10 0.117±0.00 0.146±0.01 1.133±0.79 0.177±0.00 N/A 0.647±0.25 0.934±0.28 1.575±0.00
ENSMUST00000124671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141388 N/A N/A N/A N/A N/A N/A 0.228±0.00 N/A 0.317±0.00 N/A N/A N/A N/A N/A
ENSMUST00000146413 N/A N/A N/A N/A N/A N/A N/A N/A 0.139±0.00 N/A N/A N/A N/A N/A
ENSMUST00000154213 N/A 0.349±0.08 N/A N/A 0.520±0.00 0.930±0.00 0.300±0.00 N/A N/A N/A N/A 1.874±0.00 N/A 3.667±0.00
ENSMUSG00000082163 ENSMUST00000117941 1.436±0.54 1.681±0.17 N/A N/A 2.091±0.48 2.869±0.71 0.496±0.12 1.601±0.49 3.832±5.23 1.443±0.10 0.320±0.14 5.715±1.69 5.064±0.00 5.499±0.57

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