C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-myc downstream regulated gene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069600 Ndrg3-002 ENSMUSG00000027634 10090 - 2:156927345-156992043 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069600
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069600 4.363±0.51 7.605±0.31 3.419±0.29 12.994±5.20 5.635±0.55 8.527±1.77 1.697±0.01 5.856±0.00 2.750±1.07 3.968±0.55 3.437±0.93 4.451±0.57 1.626±0.29 18.577±4.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000304 CIL_000304_0003 CGP 2:156872457-156992056
CIL_0000XP CIL_0000XP_0002 CGP 2:156927345-157007154

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000349004 NDRG3-001 protein_coding Homo_sapiens 0 1197
ENST00000359675 NDRG3-005 protein_coding Homo_sapiens 0 1033
ENST00000373773 NDRG3-201 protein_coding Homo_sapiens 0 767
ENST00000373803 NDRG3-003 protein_coding Homo_sapiens 0 1912
ENST00000422536 NDRG3-004 protein_coding Homo_sapiens 0 575

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