C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB42, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373826 RAB42-001 ENSG00000188060 9606 + 1:28592200-28595443 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLungMusclePlacentaTestisENST00000373826
Transcript ID Adrenal Brain Colon Heart Kidney Lung Muscle Placenta Testis
ENST00000373826 1.173±0.00 0.214±0.17 0.204±0.00 0.144±0.00 0.297±0.00 0.486±0.00 0.090±0.04 0.470±0.05 0.345±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0001 VISTA 1:28583201-29186892
CIL_0001X2 CIL_0001X2_0001 CGP 1:28589323-28643085
CIL_0003PX CIL_0003PX_0002 CGP 1:28592200-28719353

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040411 Rab42-001 protein_coding Mus_musculus 0 448
ENSMUST00000078259 Nsl1-001 protein_coding Mus_musculus 0.000000001 69

Loading