C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374469 SVEP1-003 ENSG00000165124 9606 - 9:110365256-110579738 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000374469
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000374469 26.541±0.00 0.259±0.00 0.233±0.00 3.195±0.00 10.949±0.00 0.966±0.00 1.040±0.00 1.272±1.15 3.999±1.02 0.870±0.00 10.260±3.43 2.256±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PS CIL_0007PS_0001 VISTA 9:109825819-110428061
CIL_0007IH CIL_0007IH_0001 CGP 9:110303521-110579880
CIL_00016G CIL_00016G_0001 CGP 9:110365251-110801579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042850 Svep1-001 protein_coding Mus_musculus 0 9799
ENSMUST00000149152 Svep1-004 processed_transcript Mus_musculus 0 1410
ENSMUST00000128783 Svep1-002 processed_transcript Mus_musculus 0 1195
ENSMUST00000146329 Svep1-003 processed_transcript Mus_musculus 0 822

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