C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor protein, translationally-controlled, pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121046 Tpt1-ps3-001 ENSMUSG00000084319 10090 - 6:99877816-99878334 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121046
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121046 72.512±29.92 15.963±2.56 24.447±19.39 28.420±21.85 23.455±8.02 22.719±2.98 26.290±2.05 27.292±4.76 35.405±22.86 20.206±4.10 23.203±7.86 112.821±67.68 7.545±9.72 6.484±3.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088J CIL_00088J_0002 VISTA 6:99586863-100189372
CIL_0003N4 CIL_0003N4_0003 CGP 6:99711299-100287441

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309246 TPT1-004 protein_coding Homo_sapiens 0 676
ENST00000379055 TPT1-003 protein_coding Homo_sapiens 0 638
ENST00000379056 TPT1-002 protein_coding Homo_sapiens 0 527
ENST00000379060 TPT1-011 protein_coding Homo_sapiens 0 669
ENST00000413759 TPT1P9-001 processed_pseudogene Homo_sapiens 0 573
ENST00000442760 TPT1-007 retained_intron Homo_sapiens 4e-36 156
ENST00000458298 TPT1P6-001 processed_pseudogene Homo_sapiens 0 507
ENST00000484604 TPT1-005 retained_intron Homo_sapiens 0 298
ENST00000490277 TPT1-006 retained_intron Homo_sapiens 1e-38 165
ENST00000527226 TPT1-012 protein_coding Homo_sapiens 0 599
ENST00000528619 TPT1-008 protein_coding Homo_sapiens 0 211
ENST00000529421 TPT1-013 processed_transcript Homo_sapiens 0 527
ENST00000530245 TPT1-009 protein_coding Homo_sapiens 0 211
ENST00000530705 TPT1-001 protein_coding Homo_sapiens 0 682
ENST00000533567 TPT1-010 retained_intron Homo_sapiens 6e-38 161
ENST00000616577 TPT1-201 protein_coding Homo_sapiens 0 676

Loading