C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily C, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379645 TRPC3-002 ENSG00000138741 9606 - 4:121879028-121951754 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLungOvaryPlacentaTestisENST00000379645
Transcript ID Adipose Brain Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000379645 0.046±0.00 0.460±0.00 0.026±0.00 0.048±0.00 0.084±0.00 0.154±0.00 0.064±0.04 0.115±0.02 0.082±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AB CIL_0007AB_0001 CGP 4:121824440-121951754
CIL_0007AC CIL_0007AC_0001 CGP 4:121879027-122362758

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005262 IEA:TAS calcium channel activity
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006811 IEA ion transport
GO:0006816 TAS calcium ion transport
GO:0007411 TAS axon guidance
GO:0007596 TAS blood coagulation
GO:0007602 TAS phototransduction
GO:0010524 IDA positive regulation of calcium ion transport into cytosol
GO:0015279 TAS store-operated calcium channel activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030168 TAS platelet activation
GO:0033198 IDA response to ATP
GO:0034220 TAS ion transmembrane transport
GO:0051592 IDA response to calcium ion
GO:0055085 TAS:IEA transmembrane transport
GO:0070588 IEA:IDA calcium ion transmembrane transport
GO:0070679 IDA inositol 1,4,5 trisphosphate binding
GO:1903244 IDA positive regulation of cardiac muscle hypertrophy in response to stress

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029271 Trpc3-001 protein_coding Mus_musculus 0 3164
ENSMUST00000146475 Trpc3-002 processed_transcript Mus_musculus 0 819
ENSDART00000063619 TRPC7 (1 of 3)-201 protein_coding Danio_rerio 0 793
ENSDART00000138703 TRPC7 (1 of 3)-001 protein_coding Danio_rerio 0 793
ENSMUST00000133542 Trpc3-005 retained_intron Mus_musculus 0 318

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