C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily C, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146475 Trpc3-002 ENSMUSG00000027716 10090 - 3:36669203-36690167 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonOvaryENSMUST00000146475
Transcript ID Adrenal Colon Ovary
ENSMUST00000146475 0.566±0.00 0.137±0.00 1.294±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AB CIL_0007AB_0002 CGP 3:36573142-36690167
CIL_0007AC CIL_0007AC_0002 CGP 3:36620482-37053033

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264811 TRPC3-001 protein_coding Homo_sapiens 0 756
ENST00000352189 TRPC7-003 protein_coding Homo_sapiens 0 553
ENST00000378459 TRPC7-005 protein_coding Homo_sapiens 0 551
ENST00000379645 TRPC3-002 protein_coding Homo_sapiens 0 819
ENST00000502753 TRPC7-006 protein_coding Homo_sapiens 0 551
ENST00000502968 TRPC3-003 protein_coding Homo_sapiens 0 296
ENST00000503275 TRPC7-002 nonsense_mediated_decay Homo_sapiens 0 551
ENST00000506449 TRPC3-004 nonsense_mediated_decay Homo_sapiens 0 756
ENST00000513104 TRPC7-001 protein_coding Homo_sapiens 0 551
ENST00000513531 TRPC3-005 protein_coding Homo_sapiens 0 756
ENST00000514963 TRPC7-004 nonsense_mediated_decay Homo_sapiens 0 551

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