C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: radical S-adenosyl methionine domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382040 RSAD2-001 ENSG00000134321 9606 + 2:6877665-6898239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000382040
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000382040 0.158±0.00 0.802±0.00 0.178±0.00 0.624±0.00 1.699±0.39 0.299±0.00 1.742±0.54 0.345±0.14 0.646±0.45 3.765±1.42 0.442±0.00 1.016±0.40 2.276±0.71 1.154±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005741 IDA mitochondrial outer membrane
GO:0005743 IDA mitochondrial inner membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0005811 ISS lipid particle
GO:0008152 IEA metabolic process
GO:0009615 IDA response to virus
GO:0016032 IEA viral process
GO:0030278 IEA regulation of ossification
GO:0034157 ISS positive regulation of toll-like receptor 7 signaling pathway
GO:0034165 ISS positive regulation of toll-like receptor 9 signaling pathway
GO:0035710 ISS CD4-positive, alpha-beta T cell activation
GO:0043367 ISS CD4-positive, alpha-beta T cell differentiation
GO:0043621 IDA protein self-association
GO:0045071 IDA negative regulation of viral genome replication
GO:0045087 IEA innate immune response
GO:0046872 IEA metal ion binding
GO:0050709 IDA negative regulation of protein secretion
GO:0051536 IEA iron-sulfur cluster binding
GO:0051539 IDA 4 iron, 4 sulfur cluster binding
GO:0051607 IDA defense response to virus
GO:2000553 ISS positive regulation of T-helper 2 cell cytokine production

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020970 Rsad2-001 protein_coding Mus_musculus 0 937
ENSMUST00000137792 Rsad2-002 nonsense_mediated_decay Mus_musculus 0 662
ENSMUST00000142732 Rsad2-003 processed_transcript Mus_musculus 0 311
ENSMUST00000106107 Rab40b-001 protein_coding Mus_musculus 0.000001 60
ENSMUST00000169308 0610011F06Rik-006 protein_coding Mus_musculus 0.000001 60
ENSMUST00000110456 0610011F06Rik-005 nonsense_mediated_decay Mus_musculus 0.000001 60
ENSMUST00000189018 Ccdc86-003 retained_intron Mus_musculus 0.000005 58
ENSMUST00000057256 6030458C11Rik-201 protein_coding Mus_musculus 0.0002 53

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