C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 60kDa protein 1 (chaperonin) pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000388967 HSPD1P6-001 ENSG00000230067 9606 - 3:36767117-36768799 transcribed_processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000388967
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000388967 0.006±0.00 0.020±0.00 0.063±0.00 0.038±0.01 0.012±0.00 0.038±0.00 0.328±0.31 0.024±0.02 0.029±0.02 0.411±0.25 0.008±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027123 Hspd1-001 protein_coding Mus_musculus 0 1916
ENSMUST00000119713 Gm12141-001 processed_pseudogene Mus_musculus 0 1912
ENSMUST00000121815 Gm12725-001 processed_pseudogene Mus_musculus 0 1557
ENSMUST00000122013 Gm12608-001 processed_pseudogene Mus_musculus 0 1175
ENSMUST00000121528 Gm14935-001 processed_pseudogene Mus_musculus 0 1020
ENSMUST00000127861 Hspd1-002 protein_coding Mus_musculus 0 737
ENSMUST00000144077 Hspd1-003 protein_coding Mus_musculus 0 512
ENSMUST00000118299 Gm12667-001 processed_pseudogene Mus_musculus 0 296

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