| Transcript ID | Breast |
|---|---|
| ENST00000394331 | 0.714±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | homeobox C6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000394331  |
HOXC6-002 |
ENSG00000197757 |
9606 | + |
12:54015897-54030733  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009B4 | CIL_0009B4_0001 | VISTA | 12:53396852-53997557 |
| CIL_0007SU | CIL_0007SU_0001 | VISTA | 12:53718454-54321661 |
| CIL_00084M | CIL_00084M_0001 | VISTA | 12:53732854-54334005 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0003714 | TAS | transcription corepressor activity |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0006357 | TAS | regulation of transcription from RNA polymerase II promoter |
| GO:0007275 | TAS | multicellular organismal development |
| GO:0043565 | IEA | sequence-specific DNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000001711
|
Hoxc6-001 | protein_coding | Mus_musculus | 0 | 1853 |
|
ENSMUST00000173210
|
Hoxc6-002 | processed_transcript | Mus_musculus | 0 | 1186 |
|
ENSMUST00000173421
|
Hoxc6-003 | processed_transcript | Mus_musculus | 0 | 422 |
