C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lamin B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395354 LMNB1-003 ENSG00000113368 9606 + 5:126777189-126819234 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyMuscleOvaryENST00000395354
Transcript ID Breast Kidney Muscle Ovary
ENST00000395354 1.082±0.00 0.481±0.00 0.337±0.00 1.732±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041Q CIL_00041Q_0001 CGP 5:126631722-126837020
CIL_0007S2 CIL_0007S2_0001 VISTA 5:126699007-127301374
CIL_00041J CIL_00041J_0001 CGP 5:126776623-127030808

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005637 IEA nuclear inner membrane
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025486 Lmnb1-001 protein_coding Mus_musculus 0 1408
ENSMUST00000128651 Lmnb1-002 retained_intron Mus_musculus 0 627

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