C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein, kinesin binding 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396175 TRAK1-001 ENSG00000182606 9606 + 3:42160169-42225889 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyOvaryTestisENST00000396175
Transcript ID Bladder Colon Kidney Ovary Testis
ENST00000396175 2.070±0.00 1.195±0.00 2.392±0.00 2.866±0.00 1.235±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000484 CIL_000484_0001 CGP 3:41246599-42225889
CIL_0007RR CIL_0007RR_0001 VISTA 3:41771738-42373225
CIL_000483 CIL_000483_0001 CGP 3:42013802-42266207

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045903 Trak1-201 protein_coding Mus_musculus 0 2922
ENSDART00000085678 trak1-201 protein_coding Danio_rerio 0 556
ENSDART00000136936 trak1-001 protein_coding Danio_rerio 0 556
ENSDART00000142161 trak1-002 processed_transcript Danio_rerio 1e-33 150

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