C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: islet cell autoantigen 1, 69kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396675 ICA1-007 ENSG00000003147 9606 - 7:8113309-8262052 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000396675
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000396675 2.660±0.00 6.148±0.00 2.223±0.00 1.558±0.00 3.041±0.00 5.220±0.00 2.838±0.00 1.372±0.00 8.880±6.74 0.999±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EL CIL_0002EL_0001 CGP 7:7968794-8262687
CIL_0002VG CIL_0002VG_0001 CGP 7:8113184-8752963

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0003674 ND molecular_function
GO:0005737 TAS cytoplasm
GO:0005829 ISS cytosol
GO:0006836 IEA neurotransmitter transport
GO:0019904 IEA protein domain specific binding
GO:0030054 IEA cell junction
GO:0030667 IDA secretory granule membrane
GO:0030672 ISS synaptic vesicle membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038403 Ica1-001 protein_coding Mus_musculus 0 1666
ENSMUST00000115520 Ica1-004 protein_coding Mus_musculus 0 1666
ENSMUST00000115519 Ica1-006 protein_coding Mus_musculus 0 1140
ENSMUST00000156695 Ica1-007 nonsense_mediated_decay Mus_musculus 0 1133
ENSMUST00000153390 Ica1-005 protein_coding Mus_musculus 0 1105
ENSMUST00000115518 Ica1-002 protein_coding Mus_musculus 0 1070
ENSMUST00000135113 Ica1-003 processed_transcript Mus_musculus 0 760
ENSMUST00000126430 Ica1-010 protein_coding Mus_musculus 0 427
ENSMUST00000127398 Ica1-011 protein_coding Mus_musculus 8.00001e-42 176

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