C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPEG complex locus
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396686 SPEG-010 ENSG00000072195 9606 + 2:219461255-219466655 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENST00000396686
Transcript ID Ovary Placenta
ENST00000396686 2.952±0.00 2.087±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_0006O0 CIL_0006O0_0001 CGP 2:219418377-219498287
CIL_0006O1 CIL_0006O1_0001 CGP 2:219434846-219506988

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0007517 TAS muscle organ development
GO:0008285 TAS negative regulation of cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113588 Speg-013 protein_coding Mus_musculus 0 1026
ENSMUST00000113587 Speg-014 protein_coding Mus_musculus 0 1000
ENSMUST00000113590 Speg-002 protein_coding Mus_musculus 0 998
ENSMUST00000122266 Speg-009 protein_coding Mus_musculus 0 955
ENSMUST00000113589 Speg-008 protein_coding Mus_musculus 0 767
ENSMUST00000137868 Speg-003 protein_coding Mus_musculus 0 540
ENSMUST00000087122 Speg-001 protein_coding Mus_musculus 0 540

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