C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPEG complex locus
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137868 Speg-003 ENSMUSG00000026207 10090 + 1:75385610-75432304 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000137868
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000137868 5.131±3.86 1.081±0.28 11.210±1.25 5.011±4.08 2.043±2.11 2.958±0.83 13.974±0.63 1.077±0.21 0.159±0.07 1.483±0.69 27.176±7.69 4.415±2.33 1.087±0.40 0.061±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_0006O0 CIL_0006O0_0002 CGP 1:75360329-75432320
CIL_0006O1 CIL_0006O1_0002 CGP 1:75375297-75443179

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312358 SPEG-004 protein_coding Homo_sapiens 0 10010
ENST00000396686 SPEG-010 protein_coding Homo_sapiens 0 540
ENST00000396688 SPEG-006 protein_coding Homo_sapiens 0 540
ENST00000396689 SPEG-007 protein_coding Homo_sapiens 0 540
ENST00000396698 SPEG-014 protein_coding Homo_sapiens 0 2165
ENST00000412982 SPEG-021 protein_coding Homo_sapiens 0 427
ENST00000431523 SPEG-009 protein_coding Homo_sapiens 0 507
ENST00000462545 SPEG-005 processed_transcript Homo_sapiens 0 861
ENST00000463218 SPEG-020 processed_transcript Homo_sapiens 0 595
ENST00000464989 SPEG-002 retained_intron Homo_sapiens 0 2165
ENST00000475921 SPEG-012 retained_intron Homo_sapiens 0 540
ENST00000485069 SPEG-008 retained_intron Homo_sapiens 0 374
ENST00000485813 SPEG-024 processed_transcript Homo_sapiens 0 10060
ENST00000491248 SPEG-017 processed_transcript Homo_sapiens 0 490
ENST00000496786 SPEG-019 processed_transcript Homo_sapiens 0 540
ENST00000498378 SPEG-001 processed_transcript Homo_sapiens 0 2165

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