C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPEG complex locus
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122266 Speg-009 ENSMUSG00000026207 10090 + 1:75401010-75404207 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyOvaryENSMUST00000122266
Transcript ID Adrenal Breast Colon Kidney Ovary
ENSMUST00000122266 11.389±4.69 4.015±0.00 12.903±3.73 5.426±1.36 17.937±2.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_0006O0 CIL_0006O0_0002 CGP 1:75360329-75432320
CIL_0006O1 CIL_0006O1_0002 CGP 1:75375297-75443179

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006468 IEA protein phosphorylation
GO:0055013 IMP cardiac muscle cell development
GO:0060541 IMP respiratory system development
GO:0072358 IMP cardiovascular system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312358 SPEG-004 protein_coding Homo_sapiens 0 540
ENST00000396686 SPEG-010 protein_coding Homo_sapiens 0 955
ENST00000396688 SPEG-006 protein_coding Homo_sapiens 0 952
ENST00000396689 SPEG-007 protein_coding Homo_sapiens 0 952
ENST00000396698 SPEG-014 protein_coding Homo_sapiens 0 952
ENST00000462545 SPEG-005 processed_transcript Homo_sapiens 0 545
ENST00000463218 SPEG-020 processed_transcript Homo_sapiens 0 545
ENST00000464989 SPEG-002 retained_intron Homo_sapiens 0 545
ENST00000475921 SPEG-012 retained_intron Homo_sapiens 0 965
ENST00000485813 SPEG-024 processed_transcript Homo_sapiens 0 540
ENST00000496786 SPEG-019 processed_transcript Homo_sapiens 0 549
ENST00000498378 SPEG-001 processed_transcript Homo_sapiens 0 952

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