C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: laminin, alpha 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399516 LAMA3-003 ENSG00000053747 9606 + 18:23689684-23954648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLungMuscleTestisENST00000399516
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Lung Muscle Testis
ENST00000399516 0.878±0.00 0.518±0.00 0.149±0.00 0.313±0.00 0.469±0.00 0.253±0.00 1.039±0.00 0.095±0.00 0.529±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AV CIL_0005AV_0001 CGP 18:23598926-23955066
CIL_0005WU CIL_0005WU_0001 CGP 18:23689443-24135610

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005102 IEA receptor binding
GO:0005515 IEA protein binding
GO:0005606 IEA laminin-1 complex
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007155 IEA cell adhesion
GO:0007165 IEA signal transduction
GO:0030155 IEA regulation of cell adhesion
GO:0030334 IEA regulation of cell migration
GO:0045995 IEA regulation of embryonic development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092070 Lama3-001 protein_coding Mus_musculus 0 4743
ENSMUST00000188815 Lama3-002 protein_coding Mus_musculus 0 3197

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