C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mannan-binding lectin serine peptidase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400897 MASP2-001 ENSG00000009724 9606 - 1:11026523-11047223 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverENST00000400897
Transcript ID Kidney Liver
ENST00000400897 19.400±0.00 35.275±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008S2 CIL_0008S2_0001 VISTA 1:10435049-11039184
CIL_0008RU CIL_0008RU_0001 VISTA 1:10491513-11092116
CIL_0008JG CIL_0008JG_0001 VISTA 1:10565145-11165671
CIL_0008JY CIL_0008JY_0001 VISTA 1:10605072-11206087

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001855 IDA complement component C4b binding
GO:0001867 IDA complement activation, lectin pathway
GO:0003824 IEA catalytic activity
GO:0004252 IDA:IEA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005576 TAS extracellular region
GO:0006508 IEA proteolysis
GO:0006956 TAS complement activation
GO:0006958 IEA complement activation, classical pathway
GO:0008233 IDA peptidase activity
GO:0045087 TAS innate immune response
GO:0048306 IPI calcium-dependent protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052060 Masp2-001 protein_coding Mus_musculus 0 1860
ENSMUST00000154898 Masp2-002 retained_intron Mus_musculus 0 953
ENSMUST00000105701 Masp2-003 protein_coding Mus_musculus 0 460
ENSMUST00000136647 Masp2-004 retained_intron Mus_musculus 0 440
ENSMUST00000105702 Tardbp-201 protein_coding Mus_musculus 7e-23 113
ENSMUST00000172073 Tardbp-203 protein_coding Mus_musculus 7e-23 113
ENSMUST00000165113 Tardbp-202 protein_coding Mus_musculus 7e-23 113
ENSMUST00000084125 Tardbp-001 protein_coding Mus_musculus 7e-23 113
ENSMUST00000186729 Tardbp-023 nonsense_mediated_decay Mus_musculus 9e-22 110
ENSMUST00000188488 Tardbp-022 protein_coding Mus_musculus 9e-22 110
ENSMUST00000188380 Tardbp-029 processed_transcript Mus_musculus 9e-22 110
ENSMUST00000188134 Tardbp-024 nonsense_mediated_decay Mus_musculus 9e-22 110

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