C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: arginine-glutamic acid dipeptide (RE) repeats
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400907 RERE-015 ENSG00000142599 9606 - 1:8353943-8656371 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryENST00000400907
Transcript ID Brain Liver Ovary
ENST00000400907 5.162±0.00 1.770±0.00 4.822±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VW CIL_0007VW_0001 VISTA 1:7770379-8371827

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105682 Rere-001 protein_coding Mus_musculus 0 2189
ENSMUST00000105680 Rere-003 protein_coding Mus_musculus 0 1166
ENSMUST00000136646 Rere-007 protein_coding Mus_musculus 0 745
ENSDART00000142085 rerea-002 protein_coding Danio_rerio 0 279
ENSMUST00000131600 Rere-008 protein_coding Mus_musculus 0 270

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