C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000401783 SVEP1-201 ENSG00000165124 9606 - 9:110365251-110579880 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000401783
Transcript ID Ovary Testis
ENST00000401783 0.326±0.00 0.062±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PS CIL_0007PS_0001 VISTA 9:109825819-110428061
CIL_0007IH CIL_0007IH_0001 CGP 9:110303521-110579880
CIL_00016G CIL_00016G_0001 CGP 9:110365251-110801579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 IEA chromatin binding
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005737 IEA cytoplasm
GO:0007155 IEA cell adhesion
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042850 Svep1-001 protein_coding Mus_musculus 0 9760
ENSMUST00000149152 Svep1-004 processed_transcript Mus_musculus 0 1411
ENSMUST00000128783 Svep1-002 processed_transcript Mus_musculus 0 1256
ENSMUST00000146329 Svep1-003 processed_transcript Mus_musculus 0 883

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