C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 58
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403629 HNRNPA1P58-001 ENSG00000219582 9606 + 6:24001824-24002430 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLungMusclePlacentaTestisENST00000403629
Transcript ID Adipose Adrenal Brain Breast Kidney Lung Muscle Placenta Testis
ENST00000403629 0.070±0.00 0.289±0.00 0.075±0.00 0.024±0.00 0.024±0.00 0.070±0.00 0.043±0.00 0.039±0.00 0.088±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 706
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 699
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 579
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 438
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 433
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 6e-28 128

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