C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11860
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122346 Gm11860-001 ENSMUSG00000083387 10090 - 4:18009218-18010227 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastLiverPlacentaENSMUST00000122346
Transcript ID Adipose Bladder Brain Breast Liver Placenta
ENSMUST00000122346 0.144±0.00 0.022±0.00 0.117±0.00 0.136±0.00 0.010±0.00 0.009±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283131 SMARCA5-001 protein_coding Homo_sapiens 2e-28 134
ENST00000330752 HNRNPA1-023 protein_coding Homo_sapiens 0 675
ENST00000340913 HNRNPA1-002 protein_coding Homo_sapiens 0 1083
ENST00000357495 HNRNPA1L2-001 protein_coding Homo_sapiens 0 737
ENST00000396326 HNRNPA1P32-001 processed_pseudogene Homo_sapiens 5e-31 139
ENST00000403629 HNRNPA1P58-001 processed_pseudogene Homo_sapiens 6e-28 128
ENST00000404243 HNRNPA1P37-001 processed_pseudogene Homo_sapiens 8e-34 148
ENST00000411735 HNRNPA1P46-001 processed_pseudogene Homo_sapiens 7e-29 132
ENST00000411857 HNRNPA1P54-001 processed_pseudogene Homo_sapiens 0 841
ENST00000412087 HNRNPA1P27-001 processed_pseudogene Homo_sapiens 0 634
ENST00000414732 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 8e-34 148
ENST00000421426 HNRNPA1P33-001 processed_pseudogene Homo_sapiens 0 339
ENST00000424481 HNRNPA1P28-001 processed_pseudogene Homo_sapiens 0 632
ENST00000426371 HNRNPA1P40-001 processed_pseudogene Homo_sapiens 0 652
ENST00000427917 HNRNPA1P63-001 processed_pseudogene Homo_sapiens 0 638
ENST00000430583 HNRNPA1P59-001 processed_pseudogene Homo_sapiens 0 521
ENST00000431344 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 8e-34 148
ENST00000432375 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 8e-34 148
ENST00000436809 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 8e-34 148
ENST00000437295 HNRNPA1P22-001 processed_pseudogene Homo_sapiens 0 627
ENST00000440352 HNRNPA1P14-001 processed_pseudogene Homo_sapiens 0 549
ENST00000440547 HNRNPA1P39-001 processed_pseudogene Homo_sapiens 4e-32 143
ENST00000440699 HNRNPA1P30-001 transcribed_processed_pseudogene Homo_sapiens 1e-36 158
ENST00000444945 HNRNPA1P10-001 processed_pseudogene Homo_sapiens 0 760
ENST00000446988 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 8e-34 148
ENST00000446999 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 8e-34 148
ENST00000450405 HNRNPA1P51-001 processed_pseudogene Homo_sapiens 1e-21 108
ENST00000452488 HNRNPA1P57-001 transcribed_processed_pseudogene Homo_sapiens 0 592
ENST00000452680 HNRNPA1P43-001 processed_pseudogene Homo_sapiens 2e-25 121
ENST00000452727 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 8e-34 148
ENST00000457180 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 8e-34 148
ENST00000457695 HNRNPA1P26-001 processed_pseudogene Homo_sapiens 0 832
ENST00000484852 HNRNPA1P20-001 processed_pseudogene Homo_sapiens 1e-32 145
ENST00000496620 HNRNPA1P17-001 unprocessed_pseudogene Homo_sapiens 0 431
ENST00000505767 HNRNPA1P56-001 processed_pseudogene Homo_sapiens 8e-34 148
ENST00000505935 HNRNPA1P55-001 processed_pseudogene Homo_sapiens 1e-31 141
ENST00000508873 HNRNPA1P65-001 processed_pseudogene Homo_sapiens 0 525
ENST00000509706 HNRNPA1P4-001 processed_pseudogene Homo_sapiens 0 569
ENST00000512366 RP11-481K16.2-002 processed_transcript Homo_sapiens 1e-29 134
ENST00000515019 RP11-481K16.2-001 transcribed_processed_pseudogene Homo_sapiens 7e-30 134
ENST00000515379 HNRNPA1P12-001 processed_pseudogene Homo_sapiens 0 693
ENST00000521273 HNRNPA1P7-001 processed_pseudogene Homo_sapiens 0 749
ENST00000521313 HNRNPA1P36-001 processed_pseudogene Homo_sapiens 0 603
ENST00000521638 HNRNPA3P7-001 processed_pseudogene Homo_sapiens 3e-28 130
ENST00000526810 HNRNPA1P60-001 processed_pseudogene Homo_sapiens 2e-25 121
ENST00000529511 HNRNPA1P72-001 processed_pseudogene Homo_sapiens 4e-17 94
ENST00000546500 HNRNPA1-001 protein_coding Homo_sapiens 0 771
ENST00000546565 HNRNPA1P50-001 processed_pseudogene Homo_sapiens 0 560
ENST00000547276 HNRNPA1-012 protein_coding Homo_sapiens 0 621
ENST00000547566 HNRNPA1-006 nonsense_mediated_decay Homo_sapiens 0 771
ENST00000547870 HNRNPA1-016 retained_intron Homo_sapiens 0 464
ENST00000548688 HNRNPA1-013 protein_coding Homo_sapiens 0 643
ENST00000550482 HNRNPA1-018 protein_coding Homo_sapiens 0 412
ENST00000551679 HNRNPA1-020 retained_intron Homo_sapiens 1e-32 143
ENST00000551702 HNRNPA1-019 protein_coding Homo_sapiens 0 350
ENST00000559135 HNRNPA1P71-001 processed_pseudogene Homo_sapiens 0 553
ENST00000559372 HNRNPA1P62-001 processed_pseudogene Homo_sapiens 0 597
ENST00000560893 HNRNPA1P45-001 processed_pseudogene Homo_sapiens 0 593
ENST00000562726 HNRNPA1P48-002 processed_transcript Homo_sapiens 0 771
ENST00000565308 HNRNPA1P48-001 transcribed_processed_pseudogene Homo_sapiens 0 771
ENST00000570662 SRR-009 protein_coding Homo_sapiens 0 281
ENST00000575692 HNRNPA1P16-001 processed_pseudogene Homo_sapiens 0 675
ENST00000599047 HNRNPA1P52-001 processed_pseudogene Homo_sapiens 0 590

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