C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13418
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119097 Gm13418-001 ENSMUSG00000082307 10090 + 2:24494068-24495011 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverOvaryPlacentaTestisENSMUST00000119097
Transcript ID Brain Colon Liver Ovary Placenta Testis
ENSMUST00000119097 0.022±0.00 0.114±0.00 0.007±0.00 0.207±0.07 1.374±2.24 0.120±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283131 SMARCA5-001 protein_coding Homo_sapiens 0 313
ENST00000330752 HNRNPA1-023 protein_coding Homo_sapiens 0 645
ENST00000340913 HNRNPA1-002 protein_coding Homo_sapiens 0 754
ENST00000342073 HNRNPA1P61-001 processed_pseudogene Homo_sapiens 0 754
ENST00000357495 HNRNPA1L2-001 protein_coding Homo_sapiens 0 990
ENST00000396326 HNRNPA1P32-001 processed_pseudogene Homo_sapiens 0 649
ENST00000403629 HNRNPA1P58-001 processed_pseudogene Homo_sapiens 0 608
ENST00000404243 HNRNPA1P37-001 processed_pseudogene Homo_sapiens 0 811
ENST00000411674 HNRNPA1P64-001 processed_pseudogene Homo_sapiens 0 501
ENST00000411735 HNRNPA1P46-001 processed_pseudogene Homo_sapiens 0 771
ENST00000411857 HNRNPA1P54-001 processed_pseudogene Homo_sapiens 0 246
ENST00000412087 HNRNPA1P27-001 processed_pseudogene Homo_sapiens 0 876
ENST00000414732 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 900
ENST00000421336 HNRNPA1P49-001 processed_pseudogene Homo_sapiens 0 579
ENST00000421426 HNRNPA1P33-001 processed_pseudogene Homo_sapiens 0 645
ENST00000424481 HNRNPA1P28-001 processed_pseudogene Homo_sapiens 0 878
ENST00000426371 HNRNPA1P40-001 processed_pseudogene Homo_sapiens 0 767
ENST00000427917 HNRNPA1P63-001 processed_pseudogene Homo_sapiens 0 907
ENST00000430583 HNRNPA1P59-001 processed_pseudogene Homo_sapiens 0 492
ENST00000431344 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 905
ENST00000432375 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 917
ENST00000436090 HNRNPA1P8-001 processed_pseudogene Homo_sapiens 0 948
ENST00000436809 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 911
ENST00000437295 HNRNPA1P22-001 processed_pseudogene Homo_sapiens 0 837
ENST00000440352 HNRNPA1P14-001 processed_pseudogene Homo_sapiens 0 676
ENST00000440547 HNRNPA1P39-001 processed_pseudogene Homo_sapiens 0 881
ENST00000440699 HNRNPA1P30-001 transcribed_processed_pseudogene Homo_sapiens 0 726
ENST00000441603 HNRNPA1P53-001 processed_pseudogene Homo_sapiens 0 832
ENST00000444886 HNRNPA1P15-001 processed_pseudogene Homo_sapiens 0 828
ENST00000444945 HNRNPA1P10-001 processed_pseudogene Homo_sapiens 0 1018
ENST00000446472 HNRNPA1P73-001 processed_pseudogene Homo_sapiens 0 625
ENST00000446988 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 917
ENST00000446999 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 917
ENST00000452488 HNRNPA1P57-001 transcribed_processed_pseudogene Homo_sapiens 0 815
ENST00000452680 HNRNPA1P43-001 processed_pseudogene Homo_sapiens 0 544
ENST00000452727 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 917
ENST00000453073 HNRNPA1P47-001 processed_pseudogene Homo_sapiens 0 486
ENST00000457180 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 917
ENST00000457695 HNRNPA1P26-001 processed_pseudogene Homo_sapiens 0 518
ENST00000458678 HNRNPA1P42-001 processed_pseudogene Homo_sapiens 0 865
ENST00000474219 HNRNPA3P8-001 processed_pseudogene Homo_sapiens 5e-31 139
ENST00000484852 HNRNPA1P20-001 processed_pseudogene Homo_sapiens 0 819
ENST00000491091 HNRNPA1P23-001 processed_pseudogene Homo_sapiens 0 446
ENST00000496620 HNRNPA1P17-001 unprocessed_pseudogene Homo_sapiens 0 523
ENST00000505767 HNRNPA1P56-001 processed_pseudogene Homo_sapiens 0 872
ENST00000508873 HNRNPA1P65-001 processed_pseudogene Homo_sapiens 0 702
ENST00000509706 HNRNPA1P4-001 processed_pseudogene Homo_sapiens 0 905
ENST00000510646 HNRNPA1P13-001 processed_pseudogene Homo_sapiens 0 806
ENST00000512366 RP11-481K16.2-002 processed_transcript Homo_sapiens 0 313
ENST00000515019 RP11-481K16.2-001 transcribed_processed_pseudogene Homo_sapiens 0 313
ENST00000515379 HNRNPA1P12-001 processed_pseudogene Homo_sapiens 0 974
ENST00000521273 HNRNPA1P7-001 processed_pseudogene Homo_sapiens 0 1029
ENST00000521313 HNRNPA1P36-001 processed_pseudogene Homo_sapiens 0 839
ENST00000523612 HNRNPA1P38-001 processed_pseudogene Homo_sapiens 0 819
ENST00000529475 HNRNPA1P76-001 processed_pseudogene Homo_sapiens 0 246
ENST00000529511 HNRNPA1P72-001 processed_pseudogene Homo_sapiens 0 425
ENST00000546500 HNRNPA1-001 protein_coding Homo_sapiens 0 1035
ENST00000546565 HNRNPA1P50-001 processed_pseudogene Homo_sapiens 0 743
ENST00000547276 HNRNPA1-012 protein_coding Homo_sapiens 0 599
ENST00000547566 HNRNPA1-006 nonsense_mediated_decay Homo_sapiens 0 1035
ENST00000547870 HNRNPA1-016 retained_intron Homo_sapiens 0 464
ENST00000548688 HNRNPA1-013 protein_coding Homo_sapiens 0 604
ENST00000550482 HNRNPA1-018 protein_coding Homo_sapiens 0 741
ENST00000551679 HNRNPA1-020 retained_intron Homo_sapiens 0 285
ENST00000551702 HNRNPA1-019 protein_coding Homo_sapiens 0 390
ENST00000558213 HNRNPA1P5-001 processed_pseudogene Homo_sapiens 0 898
ENST00000559135 HNRNPA1P71-001 processed_pseudogene Homo_sapiens 0 719
ENST00000559372 HNRNPA1P62-001 processed_pseudogene Homo_sapiens 0 758
ENST00000560893 HNRNPA1P45-001 processed_pseudogene Homo_sapiens 0 346
ENST00000562726 HNRNPA1P48-002 processed_transcript Homo_sapiens 0 1029
ENST00000565308 HNRNPA1P48-001 transcribed_processed_pseudogene Homo_sapiens 0 1026
ENST00000570662 SRR-009 protein_coding Homo_sapiens 0 305
ENST00000575692 HNRNPA1P16-001 processed_pseudogene Homo_sapiens 0 891
ENST00000599047 HNRNPA1P52-001 processed_pseudogene Homo_sapiens 0 854
ENST00000604027 HNRNPA1P67-001 processed_pseudogene Homo_sapiens 0 776

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