C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403956 RP3-406A7.1-001 ENSG00000216519 9606 + 6:136317961-136318236 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENST00000403956
Transcript ID Muscle Testis
ENST00000403956 0.062±0.00 0.183±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000879 CIL_000879_0001 VISTA 6:135802414-136405223

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 237
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 237
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 3e-27 124

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