C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6548
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167498 Gm6548-001 ENSMUSG00000091549 10090 - 17:78850792-78851956 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000167498
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000167498 6.278±2.26 2.751±0.69 9.838±1.51 1.602±0.39 6.049±2.13 4.744±0.76 1.406±0.39 4.644±0.46 5.791±2.82 3.562±0.45 0.870±0.19 5.253±2.24 5.107±2.52 2.691±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000N3 CIL_0000N3_0002 CGP 17:78835516-78882573
CIL_00085G CIL_00085G_0002 VISTA 17:78844758-79446183

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000128726 eef1a1a-001 protein_coding Danio_rerio 0 859
ENSDART00000016121 eef1a1a-002 protein_coding Danio_rerio 0 368
ENST00000309268 EEF1A1-009 protein_coding Homo_sapiens 0 1502
ENST00000316292 EEF1A1-001 protein_coding Homo_sapiens 0 1502
ENST00000325349 EEF1A1P16-001 processed_pseudogene Homo_sapiens 0 1230
ENST00000331523 EEF1A1-004 protein_coding Homo_sapiens 0 1502
ENST00000356303 EEF1A1-015 protein_coding Homo_sapiens 0 313
ENST00000359165 EEF1A1P4-001 processed_pseudogene Homo_sapiens 0 1219
ENST00000395772 EEF1A1P15-001 processed_pseudogene Homo_sapiens 0 697
ENST00000401075 RP11-439L8.2-001 processed_pseudogene Homo_sapiens 0 929
ENST00000403956 RP3-406A7.1-001 processed_pseudogene Homo_sapiens 0 235
ENST00000415278 EEF1A1P11-001 processed_pseudogene Homo_sapiens 0 1413
ENST00000416082 EEF1A1P29-001 processed_pseudogene Homo_sapiens 0 721
ENST00000417549 EEF1A1P3-001 processed_pseudogene Homo_sapiens 0 1216
ENST00000419025 EEF1A1P8-001 processed_pseudogene Homo_sapiens 0 1310
ENST00000419888 EEF1A1P34-001 processed_pseudogene Homo_sapiens 0 809
ENST00000421195 EEF1A1P14-001 processed_pseudogene Homo_sapiens 0 1182
ENST00000429708 EEF1A1P30-001 processed_pseudogene Homo_sapiens 0 974
ENST00000429983 EEF1A1P27-001 processed_pseudogene Homo_sapiens 0 774
ENST00000430498 RP11-104D3.2-001 processed_pseudogene Homo_sapiens 0 989
ENST00000430685 RP11-214N15.5-001 processed_pseudogene Homo_sapiens 0 265
ENST00000434005 EEF1A1P6-001 processed_pseudogene Homo_sapiens 0 1483
ENST00000436459 EEF1A1P5-001 processed_pseudogene Homo_sapiens 0 1491
ENST00000443590 EEF1A1P12-001 processed_pseudogene Homo_sapiens 0 845
ENST00000445363 AC010240.2-001 processed_pseudogene Homo_sapiens 0 839
ENST00000447052 EEF1A1P1-001 processed_pseudogene Homo_sapiens 0 647
ENST00000450915 EEF1A1P28-001 processed_pseudogene Homo_sapiens 0 1024
ENST00000451469 EEF1A1P24-001 processed_pseudogene Homo_sapiens 0 1271
ENST00000455918 EEF1A1-003 protein_coding Homo_sapiens 6e-29 132
ENST00000475365 EEF1A1P10-001 processed_pseudogene Homo_sapiens 0 1297
ENST00000488500 EEF1A1-011 retained_intron Homo_sapiens 0 564
ENST00000490569 EEF1A1-008 retained_intron Homo_sapiens 0 1074
ENST00000491404 EEF1A1-014 processed_transcript Homo_sapiens 0 457
ENST00000495333 EEF1A1-002 retained_intron Homo_sapiens 0 671
ENST00000495704 EEF1A1P25-001 processed_pseudogene Homo_sapiens 0 1194
ENST00000503537 EEF1A1P13-001 processed_pseudogene Homo_sapiens 0 1447
ENST00000509116 RP11-553P9.1-001 processed_pseudogene Homo_sapiens 0 1201
ENST00000513637 EEF1A1P19-001 processed_pseudogene Homo_sapiens 0 1352
ENST00000514975 EEF1A1P9-001 processed_pseudogene Homo_sapiens 0 1419
ENST00000525759 CTD-2063L20.1-001 processed_pseudogene Homo_sapiens 0 549
ENST00000547505 EEF1A1P17-001 processed_pseudogene Homo_sapiens 0 1273
ENST00000554413 EEF1A1P33-001 processed_pseudogene Homo_sapiens 0 832
ENST00000559385 EEF1A1P22-001 processed_pseudogene Homo_sapiens 0 1212
ENST00000567658 EEF1A1P38-001 processed_pseudogene Homo_sapiens 0 1236
ENST00000596811 EEF1A1P7-001 processed_pseudogene Homo_sapiens 0 1166
ENST00000610520 EEF1A1-201 protein_coding Homo_sapiens 0 1136
ENST00000615060 EEF1A1-202 protein_coding Homo_sapiens 0 1456

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