C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high mobility group box 3 pseudogene 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403971 HMGB3P19-001 ENSG00000217085 9606 - 6:153938433-153938992 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000403971
Transcript ID Testis
ENST00000403971 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QK CIL_0002QK_0002 CGP 6:153004459-154246867

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088874 Hmgb3-004 protein_coding Mus_musculus 0 508
ENSMUST00000114582 Hmgb3-003 protein_coding Mus_musculus 0 508
ENSMUST00000015361 Hmgb3-002 protein_coding Mus_musculus 0 508
ENSMUST00000072699 Hmgb3-001 protein_coding Mus_musculus 0 508
ENSMUST00000078030 Gm6104-201 protein_coding Mus_musculus 0 503
ENSMUST00000132145 Hmgb3-006 retained_intron Mus_musculus 0 496
ENSMUST00000123100 Hmgb3-005 protein_coding Mus_musculus 0 398
ENSMUST00000117806 Gm15576-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000117771 Gm5752-001 processed_pseudogene Mus_musculus 0 274

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