C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: estrogen receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404742 ESR1-004 ENSG00000091831 9606 + 6:151690496-151808166 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000404742
Transcript ID Placenta
ENST00000404742 0.300±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EH CIL_0005EH_0001 CGP 6:151494030-152129619
CIL_0005EI CIL_0005EI_0001 CGP 6:151656691-152637801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005496 IEA steroid binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0030284 IEA estrogen receptor activity
GO:0043401 IEA steroid hormone mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105589 Esr1-004 protein_coding Mus_musculus 0 285
ENSMUST00000105588 Esr1-007 protein_coding Mus_musculus 0 285
ENSMUST00000067086 Esr1-002 protein_coding Mus_musculus 0 283
ENSMUST00000138828 Esr1-003 retained_intron Mus_musculus 0 283
ENSMUST00000105590 Esr1-001 protein_coding Mus_musculus 0 283
ENSMUST00000149195 Esr1-005 processed_transcript Mus_musculus 0 283

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