C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: estrogen receptor 1 (alpha)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138828 Esr1-003 ENSMUSG00000019768 10090 + 10:4612013-4857509 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLiverENSMUST00000138828
Transcript ID Adrenal Colon Liver
ENSMUST00000138828 2.617±0.88 0.425±0.00 0.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EH CIL_0005EH_0002 CGP 10:4482502-5005614
CIL_0005EI CIL_0005EI_0002 CGP 10:4611593-5550692

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000206249 ESR1-001 protein_coding Homo_sapiens 0 1157
ENST00000338799 ESR1-002 protein_coding Homo_sapiens 0 1155
ENST00000404742 ESR1-004 protein_coding Homo_sapiens 0 283
ENST00000406599 ESR1-009 protein_coding Homo_sapiens 0 510
ENST00000427531 ESR1-008 protein_coding Homo_sapiens 0 652
ENST00000440973 ESR1-201 protein_coding Homo_sapiens 0 1157
ENST00000443427 ESR1-202 protein_coding Homo_sapiens 0 1155
ENST00000446550 ESR1-007 protein_coding Homo_sapiens 0 374
ENST00000456483 ESR1-203 protein_coding Homo_sapiens 0 510
ENST00000482101 ESR1-003 processed_transcript Homo_sapiens 0 350
ENST00000488573 ESR1-006 processed_transcript Homo_sapiens 0 287

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