C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404787 RP1-140K8.2-001 ENSG00000218472 9606 - 6:3913922-3914292 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleTestisENST00000404787
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Testis
ENST00000404787 0.036±0.00 0.222±0.00 0.074±0.00 0.108±0.00 0.103±0.00 0.068±0.00 0.072±0.00 0.032±0.00 0.165±0.00 0.098±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y7 CIL_0007Y7_0001 VISTA 6:3643401-4244038
CIL_0003IQ CIL_0003IQ_0001 CGP 6:3849386-4064983

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080300 Rps25-201 protein_coding Mus_musculus 0 409
ENSMUST00000119876 Rps25-ps1-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000072718 Gm4963-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000116078 Gm12643-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000137940 Gm16288-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000117304 Gm13664-001 processed_pseudogene Mus_musculus 6e-26 121

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