C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: radixin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405097 RDX-002 ENSG00000137710 9606 - 11:110195561-110296712 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000405097
Transcript ID Brain
ENST00000405097 1.595±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DH CIL_0008DH_0001 VISTA 11:109830170-110432509

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IEA ruffle
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0005902 IEA microvillus
GO:0005925 IDA focal adhesion
GO:0007010 IEA cytoskeleton organization
GO:0008092 IEA cytoskeletal protein binding
GO:0010628 IGI positive regulation of gene expression
GO:0019898 IEA extrinsic component of membrane
GO:0030027 IEA lamellipodium
GO:0030033 IEA microvillus assembly
GO:0030175 IEA filopodium
GO:0030315 IEA T-tubule
GO:0032420 IEA stereocilium
GO:0044822 IDA poly(A) RNA binding
GO:0045176 IEA apical protein localization
GO:0045177 IEA apical part of cell
GO:0051286 IEA cell tip
GO:0051693 IEA actin filament capping
GO:0061028 IGI establishment of endothelial barrier
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000590 Rdx-201 protein_coding Mus_musculus 0 2412
ENSMUST00000163153 Rdx-203 protein_coding Mus_musculus 0 2333
ENSMUST00000061352 Rdx-202 protein_coding Mus_musculus 0 1685

Loading