| Transcript ID | Brain | Ovary |
|---|---|---|
| ENST00000406386 | 0.250±0.14 | 3.442±2.65 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | TRIO and F-actin binding protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000406386  |
TRIOBP-001 |
ENSG00000100106 |
9606 | + |
22:37697004-37776556  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00099H | CIL_00099H_0001 | VISTA | 22:37683926-38284300 |
| CIL_0008KJ | CIL_0008KJ_0001 | VISTA | 22:37685616-38286450 |
| CIL_00040B | CIL_00040B_0001 | CGP | 22:37686414-37776556 |
| CIL_0008BX | CIL_0008BX_0001 | VISTA | 22:37696030-38296592 |
| CIL_0001D1 | CIL_0001D1_0001 | CGP | 22:37697004-37807436 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IEA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0005925 | IDA | focal adhesion |
| GO:0007067 | IEA | mitotic nuclear division |
| GO:0015629 | IDA | actin cytoskeleton |
| GO:0017049 | NAS | GTP-Rho binding |
| GO:0030047 | NAS | actin modification |
| GO:0031625 | IPI | ubiquitin protein ligase binding |
| GO:0045159 | NAS | myosin II binding |
| GO:0051015 | IDA | actin filament binding |
| GO:0051016 | NAS | barbed-end actin filament capping |
| GO:1900026 | IDA | positive regulation of substrate adhesion-dependent cell spreading |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000109688
|
Triobp-201 | protein_coding | Mus_musculus | 0 | 2010 |
|
ENSMUST00000109687
|
Triobp-005 | protein_coding | Mus_musculus | 0 | 2010 |
|
ENSMUST00000109689
|
Triobp-002 | protein_coding | Mus_musculus | 0 | 2010 |
|
ENSMUST00000109690
|
Triobp-001 | protein_coding | Mus_musculus | 0 | 2010 |
|
ENSMUST00000140228
|
Triobp-003 | processed_transcript | Mus_musculus | 0 | 1271 |
|
ENSMUST00000130663
|
Triobp-007 | protein_coding | Mus_musculus | 0 | 876 |
|
ENSMUST00000129922
|
Triobp-008 | processed_transcript | Mus_musculus | 0 | 440 |
|
ENSMUST00000144151
|
Triobp-006 | protein_coding | Mus_musculus | 0 | 363 |
|
ENSMUST00000034431
|
Tmem170-201 | protein_coding | Mus_musculus | 0.000000007 | 69 |
|
ENSMUST00000173269
|
Neu1-002 | retained_intron | Mus_musculus | 0.00005 | 57 |
