C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: estrogen receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406599 ESR1-009 ENSG00000091831 9606 + 6:151807679-152098978 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000406599
Transcript ID Heart
ENST00000406599 0.520±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EH CIL_0005EH_0001 CGP 6:151494030-152129619
CIL_0005EI CIL_0005EI_0001 CGP 6:151656691-152637801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 NAS:IEA steroid hormone receptor activity
GO:0005496 IEA steroid binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0030284 IEA estrogen receptor activity
GO:0043401 IEA steroid hormone mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000137012 Esr1-006 processed_transcript Mus_musculus 0 575
ENSMUST00000105589 Esr1-004 protein_coding Mus_musculus 0 575
ENSMUST00000067086 Esr1-002 protein_coding Mus_musculus 0 575
ENSMUST00000105590 Esr1-001 protein_coding Mus_musculus 0 575
ENSMUST00000138828 Esr1-003 retained_intron Mus_musculus 0 510
ENSMUST00000149195 Esr1-005 processed_transcript Mus_musculus 0 510
ENSMUST00000105588 Esr1-007 protein_coding Mus_musculus 0 508
ENSMUST00000127934 Esr1-009 processed_transcript Mus_musculus 0 337
ENSMUST00000127145 Esr1-010 processed_transcript Mus_musculus 0 237

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