C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407698 RP11-812I20.2-001 ENSG00000216813 9606 + 6:47562622-47563018 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryTestisENST00000407698
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000407698 0.033±0.00 0.034±0.00 0.223±0.19 2.895±0.00 1.028±1.00 0.067±0.00 0.321±0.26 0.064±0.00 0.062±0.00 0.121±0.05 0.220±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007L CIL_00007L_0002 CGP 6:47231532-47627263

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183090 Rps12l1-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000073926 Rps12-201 protein_coding Mus_musculus 0 318
ENSMUST00000086764 Rps12-ps3-201 protein_coding Mus_musculus 0 318
ENSMUST00000139165 Rps12-ps9-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000117447 Rps12-ps10-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000119773 Rps12-ps19-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000179356 Rps12-ps14-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000178365 Rps12-ps13-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000179567 Rps12-ps15-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000179020 Rps12-ps12-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000178427 Rps12-ps11-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000118529 Rps12-ps16-001 processed_pseudogene Mus_musculus 0 294
ENSMUST00000179067 Rps12-ps17-001 processed_pseudogene Mus_musculus 0 294
ENSMUST00000179420 Rps12-ps18-001 processed_pseudogene Mus_musculus 0 294
ENSMUST00000179239 Rps12-ps6-001 processed_pseudogene Mus_musculus 0 294
ENSMUST00000121168 Rps12-ps20-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000178172 Rps12-ps21-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000179414 Rps12-ps23-001 processed_pseudogene Mus_musculus 0 276
ENSMUST00000179382 Rps12-ps22-001 processed_pseudogene Mus_musculus 0 276
ENSMUST00000118272 Rps12-ps5-001 processed_pseudogene Mus_musculus 0 270

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