C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407969 SETD5-004 ENSG00000168137 9606 + 3:9428925-9478154 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000407969
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000407969 5.135±0.00 4.519±0.00 2.283±0.00 1.542±0.00 3.887±0.61 5.012±0.00 8.484±0.00 2.800±1.27 6.928±1.30 2.131±0.92 5.012±4.13 2.220±0.73 5.611±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QC CIL_0004QC_0001 CGP 3:9362842-9479240
CIL_0002W7 CIL_0002W7_0001 CGP 3:9397615-9553802

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113157 Setd5-201 protein_coding Mus_musculus 0 6874
ENSMUST00000113155 Setd5-002 protein_coding Mus_musculus 0 6874
ENSMUST00000042889 Setd5-001 protein_coding Mus_musculus 0 6433
ENSMUST00000149584 Setd5-008 retained_intron Mus_musculus 0 6429
ENSMUST00000142215 Setd5-006 processed_transcript Mus_musculus 0 5637
ENSMUST00000153513 Setd5-011 processed_transcript Mus_musculus 0 3707
ENSMUST00000150107 Setd5-010 retained_intron Mus_musculus 0 3264
ENSMUST00000141072 Setd5-005 retained_intron Mus_musculus 0 2673
ENSMUST00000138327 Setd5-009 retained_intron Mus_musculus 0 1646
ENSMUST00000124467 Setd5-007 retained_intron Mus_musculus 0 1589
ENSMUST00000156048 Setd5-013 processed_transcript Mus_musculus 0 363
ENSMUST00000125003 Setd5-012 processed_transcript Mus_musculus 0 309
ENSMUST00000136128 Setd5-004 processed_transcript Mus_musculus 2e-31 143
ENSMUST00000143998 Setd5-003 retained_intron Mus_musculus 9e-31 141

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