C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | spermatogenesis associated 13 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000409126  |
SPATA13-011 |
ENSG00000182957 |
9606 | + |
13:24270719-24303206  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008FK | CIL_0008FK_0001 | VISTA | 13:23782295-24387118 |
| CIL_0000G5 | CIL_0000G5_0002 | CGP | 13:23979805-24322535 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005089 | IEA | Rho guanyl-nucleotide exchange factor activity |
| GO:0005515 | IEA | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0032321 | IEA | positive regulation of Rho GTPase activity |
| GO:0035023 | IEA | regulation of Rho protein signal transduction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000022566
|
Spata13-201 | protein_coding | Mus_musculus | 0 | 1363 |
|
ENSMUST00000162945
|
Spata13-002 | protein_coding | Mus_musculus | 0 | 1363 |
|
ENSMUST00000160973
|
Spata13-001 | protein_coding | Mus_musculus | 0 | 1363 |
|
ENSMUST00000162939
|
Spata13-003 | retained_intron | Mus_musculus | 0 | 1081 |
|
ENSMUST00000047664
|
Arhgef4-001 | protein_coding | Mus_musculus | 0 | 241 |
|
ENSMUST00000162599
|
Arhgef4-005 | protein_coding | Mus_musculus | 0 | 241 |
|
ENSMUST00000159747
|
Arhgef4-004 | protein_coding | Mus_musculus | 0 | 241 |
