C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Rho guanine nucleotide exchange factor (GEF) 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000409303  |
ARHGEF4-005 |
ENSG00000136002 |
9606 | + |
2:130930958-131046189  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001J9 | CIL_0001J9_0001 | CGP | 2:130755435-131047263 |
| CIL_0001J8 | CIL_0001J8_0001 | CGP | 2:130836916-131093460 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005089 | IEA | Rho guanyl-nucleotide exchange factor activity |
| GO:0005515 | IEA | protein binding |
| GO:0032321 | IEA | positive regulation of Rho GTPase activity |
| GO:0035023 | IEA | regulation of Rho protein signal transduction |
| GO:0035556 | IEA | intracellular signal transduction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000162599
|
Arhgef4-005 | protein_coding | Mus_musculus | 0 | 1855 |
|
ENSMUST00000047664
|
Arhgef4-001 | protein_coding | Mus_musculus | 0 | 1219 |
|
ENSMUST00000159747
|
Arhgef4-004 | protein_coding | Mus_musculus | 0 | 1219 |
|
ENSMUST00000160855
|
Arhgef4-003 | nonsense_mediated_decay | Mus_musculus | 0 | 532 |
|
ENSMUST00000159021
|
Arhgef4-006 | protein_coding | Mus_musculus | 0 | 516 |
|
ENSMUST00000159059
|
Arhgef4-007 | retained_intron | Mus_musculus | 0 | 403 |
|
ENSMUST00000162760
|
Arhgef4-002 | retained_intron | Mus_musculus | 0 | 403 |
|
ENSMUST00000022566
|
Spata13-201 | protein_coding | Mus_musculus | 0 | 202 |
|
ENSMUST00000162131
|
Spata13-009 | protein_coding | Mus_musculus | 0 | 202 |
|
ENSMUST00000162945
|
Spata13-002 | protein_coding | Mus_musculus | 0 | 202 |
|
ENSMUST00000160973
|
Spata13-001 | protein_coding | Mus_musculus | 0 | 202 |
