C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: B-cell CLL/lymphoma 11A (zinc finger protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409351 BCL11A-004 ENSG00000119866 9606 - 2:60541882-60553500 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainLiverENST00000409351
Transcript ID Adipose Bladder Brain Liver
ENST00000409351 0.144±0.00 0.498±0.00 5.777±0.00 1.419±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LM CIL_0007LM_0001 UCNEbase 2:57740887-60568309
CIL_0008BH CIL_0008BH_0001 VISTA 2:59914360-60515380
CIL_000881 CIL_000881_0001 VISTA 2:59970922-60574878
CIL_0008WW CIL_0008WW_0001 VISTA 2:59988962-60590957
CIL_0008GM CIL_0008GM_0001 VISTA 2:60234269-60835938
CIL_0009DA CIL_0009DA_0001 VISTA 2:60267677-60869129
CIL_0008PG CIL_0008PG_0001 VISTA 2:60327921-60929753

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109514 Bcl11a-006 protein_coding Mus_musculus 0 979
ENSMUST00000109516 Bcl11a-005 protein_coding Mus_musculus 0 979
ENSMUST00000124148 Bcl11a-004 retained_intron Mus_musculus 0 979
ENSMUST00000000881 Bcl11a-003 protein_coding Mus_musculus 0 979
ENSMUST00000118955 Bcl11a-001 protein_coding Mus_musculus 0 538
ENSDART00000087426 bcl11aa-001 protein_coding Danio_rerio 0 268
ENSDART00000140827 bcl11ab-001 protein_coding Danio_rerio 4e-20 102
ENSDART00000092040 bcl11ab-201 protein_coding Danio_rerio 5e-19 99

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